| 2.8 | Class: C3H zinc finger factors (C3H), Alignment |
| Aligned C3H sequences (Class 2.8): | |
| Alignment of the whole DNA-binding domains, each comprising two repeats: | |
ICKYFLER-KCIKGDQCKFDHDAEIEKKKEMCKFYV-QGYCTRGENCLYLHNEYPCKFYHTGTKCYQGEYCKFSHAPL ZC3H8 ICKYFVEG-RCTWGDHCNFSHDIELPKKRELCKFYI-TGFCARAENCPYMHGDFPCKLYHTTGNCINGDDCMFSHDPL ZC3H4 ICKYFLEG-RCIKGDQCKFDHDAELEKRKEICKFYL-QGYCTKGENCIYMHNEFPCKFYHSGAKCYQGDNCKFSHDDL ZC3H6 PCPFFLEG-KCRFKENCRFSHGQV------------------------------------------------------ ZGPAT ------------------------------MCRDLRQQGGCPRGTNCTFAHSQE RC3H2 YCSYFLKNMQCPKPD-CMYLHELG------------------------------------------------------ CNOT4
| Alignment of the individual repeats: |
ICKYFLER-KCIKGDQCKFDHDAE ZC3H8(1) MCKFYVQG-YCTRGENCLYLHNEY ZC3H8(2) PCKFYHTGTKCYQGEYCKFSHAPL ZC3H8(3) ICKYFVEG-RCTWGDHCNFSHDIE ZC3H4(1) LCKFYITG-FCARAENCPYMHGDF ZC3H4(2) PCKLYHTTGNCINGDDCMFSHDPL ZC3H4(3) ICKYFLEG-RCIKGDQCKFDHDAE ZC3H6(1) ICKFYLQG-YCTKGENCIYMHNEF ZC3H6(2) PCKFYHSGAKCYQGDNCKFSHDDL ZC3H6(3) PCPFFLEG-KCRFKENCRFSHGQV ZGPAT MCRDLRQQGGCPRGTNCTFAHSQE RC3H2 YCSYFLKNMQCPKPD-CMYLHELG CNOT4